Table 4. Number of genes associated with the general COG functional categories
Code | value | %age | Description |
|---|---|---|---|
J | 166 | 5.2 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.0 | RNA processing and modification |
K | 251 | 7.8 | Transcription |
L | 114 | 3.5 | Replication, recombination and repair |
B | 1 | 0.0 | Chromatin structure and dynamics |
D | 34 | 1.1 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 33 | 1.0 | Defense mechanisms |
T | 152 | 4.7 | Signal transduction mechanisms |
M | 184 | 5.7 | Cell wall/membrane biogenesis |
N | 81 | 2.5 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 77 | 2.4 | Intracellular trafficking and secretion, and vesicular transport |
O | 122 | 3.8 | Posttranslational modification, protein turnover, chaperones |
C | 207 | 6.4 | Energy production and conversion |
G | 227 | 7.1 | Carbohydrate transport and metabolism |
E | 324 | 10.1 | Amino acid transport and metabolism |
F | 81 | 2.5 | Nucleotide transport and metabolism |
H | 152 | 4.7 | Coenzyme transport and metabolism |
I | 110 | 3.4 | Lipid transport and metabolism |
P | 175 | 5.4 | Inorganic ion transport and metabolism |
Q | 76 | 2.4 | Secondary metabolites biosynthesis, transport and catabolism |
R | 385 | 12.0 | General function prediction only |
S | 269 | 8.4 | Function unknown |
- | 570 | 16.7 | Not in COGs |