Table 4. Number of genes associated with the general COG functional categories
Code | value | %age | Description |
|---|---|---|---|
J | 154 | 3.4 | Translation, ribosomal structure and biogenesis |
A | 20 | 0.4 | RNA processing and modification |
K | 398 | 8.7 | Transcription |
L | 305 | 6.7 | Replication, recombination and repair |
B | 1 | 0.0 | Chromatin structure and dynamics |
D | 34 | 0.7 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 46 | 1.0 | Defense mechanisms |
T | 193 | 4.2 | Signal transduction mechanisms |
M | 176 | 3.9 | Cell wall/membrane/envelope biogenesis |
N | 10 | 0.2 | Cell motility |
Z | 1 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 38 | 0.8 | Intracellular trafficking, secretion and vesicular transport |
O | 132 | 2.9 | Posttranslational modification, protein turnover, chaperones |
C | 303 | 6.6 | Energy production and conversion |
G | 198 | 4.3 | Carbohydrate transport and metabolism |
E | 320 | 7.0 | Amino acid transport and metabolism |
F | 81 | 1.8 | Nucleotide transport and metabolism |
H | 170 | 3.7 | Coenzyme transport and metabolism |
I | 412 | 9.0 | Lipid transport and metabolism |
P | 216 | 4.7 | Inorganic ion transport and metabolism |
Q | 362 | 7.9 | Secondary metabolites biosynthesis, transport and catabolism |
R | 636 | 14.0 | General function prediction only |
S | 351 | 7.7 | Function unknown |
- | 1,396 | 25.7 | Not in COGs |