Table 3. Genome Statistics
From: High quality draft genome sequence of Segniliparus rugosus CDC 945T= (ATCC BAA-974T)
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 3,647,826 | 100.00% |
DNA coding region (bp) | 3,156,492 | 86.35% |
DNA G+C content (bp) | 2,484,899 | 68.12% |
Number of replicons | unknown | Â |
Extrachromosomal elements | unknown | Â |
Total genes | 3,571 | 100.0% |
tRNA genes | 46 | 1.28% |
rRNA genes | 3 | 0.08% |
rRNA operons | 1 | 0.03% |
CRISPR repeats | 0 | Â |
Protein-coding genes | 3,522 | 98.62% |
Pseudo genes (partial genes) | 6 (233) | 0.17% (6.52%) |
Genes with function prediction | 2,486 | 69.62% |
Genes in paralog clusters | 194 | 5.43% |
Genes assigned to COGS | 1,897 | 53.12% |
Genes assigned Pfam domains | 2,451 | 68.64% |
Genes with signal peptides | 412 | 11.54% |
Genes with transmembrane helices | 590 | 16.52% |