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Table 4. Number of genes associated with the general COG functional categories

From: Genome sequence of the moderately thermophilic halophile Flexistipes sinusarabici strain (MAS10T)

Code value %age Description
J 145 7.0 Translation, ribosomal structure and biogenesis
A 1 0.1 RNA processing and modification
K 84 4.0 Transcription
L 205 9.8 Replication, recombination and repair
B 2 0.1 Chromatin structure and dynamics
D 21 1.0 Cell cycle control, cell division, chromosome partitioning
Y 0 0.0 Nuclear structure
V 26 1.3 Defense mechanisms
T 115 5.5 Signal transduction mechanisms
M 135 6.5 Cell wall/membrane/envelope biogenesis
N 36 1.7 Cell motility
Z 0 0.0 Cytoskeleton
W 0 0.0 Extracellular structures
U 62 3.0 Intracellular trafficking, secretion, and vesicular transport
O 81 3.9 Posttranslational modification, protein turnover, chaperones
C 174 8.3 Energy production and conversion
G 66 3.2 Carbohydrate transport and metabolism
E 198 9.5 Amino acid transport and metabolism
F 52 2.5 Nucleotide transport and metabolism
H 115 5.5 Coenzyme transport and metabolism
I 60 2.9 Lipid transport and metabolism
P 86 4.1 Inorganic ion transport and metabolism
Q 32 1.5 Secondary metabolites biosynthesis, transport and catabolism
R 246 11.8 General function prediction only
S 145 7.0 Function unknown
- 475 19.8 Not in COGs