Table 3. Nucleotide content and gene count levels of the genome

Size (bp)

2,196,266

100.0%

G+C content (bp)

969,331

44.1%

Coding region (bp)

1,996,425

90.9%

Number of replicons

1

Extrachromosomal elements

0

Total genes

2,622

RNA genes

55

rRNA operons

1

Protein-coding genes

2,567

100.0%

Pseudogenes

87

3.4%

Genes with function prediction

1,619

63.1%

Genes in paralog clusters

350

13.6%

Genes assigned to COGs

1,820

70.9%

Genes assigned Pfam domains

1,889

73.6%

Genes with signal peptides

269

10.5%

Genes with transmembrane helices

502

19.6%

CRISPR repeats

6

100.0%