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Table 4. Number of genes associated with the general COG functional categories in P. lavamentivorans DS-1T

From: Complete genome sequence of Parvibaculum lavamentivorans type strain (DS-1T)

Code Value %age Description
J 163 5.07 Translation, ribosomal structure and biogenesis
A 1 0.0 RNA processing and modification
K 243 7.0 Transcription
L 137 3.9 Replication, recombination and repair
B 1 0.0 Chromatin structure and dynamics
D 25 0.7 Cell cycle control, mitosis and meiosis
Y 0 0.0 Nuclear structure
Z 0 0 Cytoskeleton
W 0 0 Extracellular structures
V 85 2.4 Defense mechanisms
T 118 3.4 Signal transduction mechanisms
M 131 3.8 Cell wall/membrane biogenesis
N 6 0.2 Cell motility
U 39 1.1 Intracellular trafficking and secretion
O 77 2.2 Posttranslational modification, protein turnover, chaperones
C 153 4.4 Energy production and conversion
G 294 8.4 Carbohydrate transport and metabolism
E 214 6.1 Amino acid transport and metabolism
F 79 2.3 Nucleotide transport and metabolism
H 110 3.2 Coenzyme transport and metabolism
I 73 2.1 Lipid transport and metabolism
P 152 4.4 Inorganic ion transport and metabolism
Q 30 0.9 Secondary metabolites biosynthesis, transport and catabolism
R 318 9.1 General function prediction only
S 200 5.7 Function unknown
- 1082 31.0 Not in COGs