Complete genome sequence of Parvibaculum lavamentivorans type strain (DS-1T)

Table 3. Nucleotide and gene count levels of the genome of P. lavamentivorans DS-1^T

Attribute	Value	% of total^a
Genome size (bp)	3,914,745	100
DNA coding region (bp)	3,535,064	90.30
G+C content (bp)	2,439,986	62.33
Number of replicons	1
Extrachromosomal elements	0
Total genes	3,714	100
RNA genes	60	1.62
rRNA operons	1
Protein-coding genes	3,654	98.38
Pseudo genes	18	0.48
Genes with function prediction	2,723	73.32
Genes in paralog clusters	620	16.69
Genes assigned to COGs	2,904	78.19
Genes assigned to Pfam domains	3,054	82.23
Genes with signal peptides	717	19.31
Genes connected to KEGG pathways	1,085	29.21
Genes with transporter classification	430	11.58
Genes with transmembrane helices	782	21.06
CRISPR count	1	% of total^a

^a) The total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome.

ISSN: 2524-6372