Skip to main content

Table 4. Number of genes associated with the 21 general COG functional categories

From: Complete genome sequence of Pedobacter heparinus type strain (HIM 762-3T)

Code Value % Description
J 154 3.6 Translation, ribosomal structure and biogenesis
A 0 0.0 RNA processing and modification
K 281 6.5 Transcription
L 113 2.6 Replication, recombination and repair
B 1 0.0 Chromatin structure and dynamics
D 19 0.4 Cell cycle control, mitosis and meiosis
Y 0 0.0 Nuclear structure
V 59 1.4 Defense mechanisms
T 222 5.2 Signal transduction mechanisms
M 265 6.1 Cell wall/membrane biogenesis
N 13 0.3 Cell motility
Z 0 0.0 Cytoskeleton
W 0 0.0 Extracellular structures
U 48 1.1 Intracellular trafficking and secretion
O 116 2.7 Posttranslational modification, protein turnover, chaperones
C 140 3.3 Energy production and conversion
G 292 6.7 Carbohydrate transport and metabolism
E 209 4.9 Amino acid transport and metabolism
F 65 1.5 Nucleotide transport and metabolism
H 136 3.1 Coenzyme transport and metabolism
I 104 2.4 Lipid transport and metabolism
P 234 5.4 Inorganic ion transport and metabolism
Q 58 1.3 Secondary metabolites biosynthesis, transport and catabolism
R 373 8.7 General function prediction only
S 229 5.3 Function unknown
- 1481 34.5 Not in COGs