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Table 1. Classification and general features of P. heparinus HIM 762-3T based on MIGS recommendations [17]

From: Complete genome sequence of Pedobacter heparinus type strain (HIM 762-3T)

MIGS ID Property Term Evidence code
  Current classification Domain Bacteria  
  Phylum Bacteroidetes  
  Class Sphingobacteria TAS [18]
  Order Sphingobacteriales TAS [18]
  Family Sphingobacteriaceae TAS [4]
  Genus Pedobacter TAS [1]
  Species Pedobacter heparinus TAS [1]
  Type strain HIM 762-3  
  Gram stain negative TAS [4]
  Cell shape rod-shaped TAS [4]
  Motility probably gliding, non-flagellated TAS [4]
  Sporulation non-sporulating TAS [4]
  Temperature range mesophile, 10–35°C TAS [2]
  Optimum temperature 25–30°C for growth TAS [2]
  Salinity 0–3% NaCl TAS [2]
MIGS-22 Oxygen requirement aerobe TAS [1,2]
  Carbon source carbohydrates, glycosaminoglycans TAS [1,4]
  Energy source chemoorganotroph TAS [1,2,4]
MIGS-6 Habitat soil TAS [1]
MIGS-15 Biotic relationship free living NAS
MIGS-14 Pathogenicity none NAS
  Biosafety level 1 TAS [19]
  Isolation not reported  
MIGS-4 Geographic location not reported  
MIGS-5 Sample collection time before 1956 NAS
MIGS-4.1 Latitude - Longitude not reported  
MIGS-4.3 Depth not reported  
MIGS-4.4 Altitude not reported  
  1. Evidence codes - IDA: Inferred from Direct Assay (first time in publication); TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [20]. If the evidence code is IDA, then the property was directly observed for a live isolate by one of the authors or an expert mentioned in the acknowledgements.