Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Tolumonas auensis type strain (TA 4T)
Code | value | %age | Description |
|---|---|---|---|
J | 171 | 5.9 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.0 | RNA processing and modification |
K | 236 | 8.1 | Transcription |
L | 150 | 5.2 | Replication, recombination and repair |
B | 0 | 0.0 | Chromatin structure and dynamics |
D | 36 | 1.3 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 48 | 1.7 | Defense mechanisms |
T | 124 | 4.3 | Signal transduction mechanisms |
M | 163 | 5.6 | Cell wall/membrane biogenesis |
N | 29 | 1.0 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 71 | 2.5 | Intracellular trafficking and secretion, and vesicular transport |
O | 114 | 3.9 | Posttranslational modification, protein turnover, chaperones |
C | 184 | 6.4 | Energy production and conversion |
G | 301 | 10.4 | Carbohydrate transport and metabolism |
E | 241 | 8.4 | Amino acid transport and metabolism |
F | 70 | 2.4 | Nucleotide transport and metabolism |
H | 162 | 5.6 | Coenzyme transport and metabolism |
I | 64 | 2.2 | Lipid transport and metabolism |
P | 141 | 4.9 | Inorganic ion transport and metabolism |
Q | 48 | 1.7 | Secondary metabolites biosynthesis, transport and catabolism |
R | 296 | 10.2 | General function prediction only |
S | 240 | 8.3 | Function unknown |
- | 663 | 20.2 | Not in COGs |