Table 2. Genome sequencing project information
From: Complete genome sequence of the gliding, heparinolytic Pedobacter saltans type strain (113T)
MIGS ID | Property | Term |
|---|---|---|
MIGS-31 | Finishing quality | Finished |
MIGS-28 | Libraries used | Tree genomic libraries: one 454 pyrosequence standard library, one 454 PE library (7.7 kb insert size), one Illumina library |
MIGS-29 | Sequencing platforms | Illumina GAii, 454 GS FLX Titanium |
MIGS-31.2 | Sequencing coverage | 645.0 Ă— Illumina; 19.5 Ă— pyrosequence |
MIGS-30 | Assemblers | Newbler version 2.3, Velvet version 0.7.63, phrap version SPS - 4.24 |
MIGS-32 | Gene calling method | Prodigal 1.4, GenePRIMP |
| Â | INSDC ID | CP002545 |
| Â | Genbank Date of Release | March 2, 2011 |
| Â | GOLD ID | Gc01673 |
| Â | NCBI project ID | 49337 |
| Â | Database: IMG-GEBA | 649633082 |
MIGS-13 | Source material identifier | DSM 12145 |
| Â | Project relevance | Tree of Life, GEBA |