Table 4. Number of genes associated with the general COG functional categories
Code | value | %age | Description |
|---|---|---|---|
J | 153 | 5.6 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 198 | 7.2 | Transcription |
L | 192 | 7.0 | Replication, recombination and repair |
B | 1 | 0.0 | Chromatin structure and dynamics |
D | 36 | 1.3 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 44 | 1.6 | Defense mechanisms |
T | 121 | 4.4 | Signal transduction mechanisms |
M | 116 | 4.2 | Cell wall/membrane/envelope biogenesis |
N | 62 | 2.3 | Cell motility |
Z | 1 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 41 | 1.5 | Intracellular trafficking, secretion and vesicular transport |
O | 95 | 3.5 | Posttranslational modification, protein turnover, chaperones |
C | 217 | 7.9 | Energy production and conversion |
G | 111 | 4.1 | Carbohydrate transport and metabolism |
E | 255 | 9.3 | Amino acid transport and metabolism |
F | 68 | 2.5 | Nucleotide transport and metabolism |
H | 133 | 4.9 | Coenzyme transport and metabolism |
I | 145 | 5.3 | Lipid transport and metabolism |
P | 133 | 4.9 | Inorganic ion transport and metabolism |
Q | 97 | 3.5 | Secondary metabolites biosynthesis, transport and catabolism |
R | 298 | 10.9 | General function prediction only |
S | 224 | 8.2 | Function unknown |
- | 945 | 27.8 | Not in COGs |