Table 4. Number of genes associated with the general COG functional categories
Code | value | %age | Description |
|---|---|---|---|
J | 168 | 6.0 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 212 | 8.8 | Transcription |
L | 137 | 5.7 | Replication, recombination and repair |
B | 1 | 0.0 | Chromatin structure and dynamics |
D | 22 | 0.9 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 57 | 2.4 | Defense mechanisms |
T | 183 | 7.6 | Signal transduction mechanisms |
M | 222 | 9.2 | Cell wall/membrane/envelope biogenesis |
N | 8 | 0.3 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 42 | 1.8 | Intracellular trafficking, secretion, and vesicular transport |
O | 106 | 4.4 | Posttranslational modification, protein turnover, chaperones |
C | 117 | 4.9 | Energy production and conversion |
G | 76 | 3.2 | Carbohydrate transport and metabolism |
E | 136 | 5.7 | Amino acid transport and metabolism |
F | 63 | 2.6 | Nucleotide transport and metabolism |
H | 114 | 4.7 | Coenzyme transport and metabolism |
I | 101 | 4.2 | Lipid transport and metabolism |
P | 116 | 4.8 | Inorganic ion transport and metabolism |
Q | 45 | 1.9 | Secondary metabolites biosynthesis, transport and catabolism |
R | 286 | 11.9 | General function prediction only |
S | 194 | 8.1 | Function unknown |
- | 1,962 | 47.5 | Not in COGs |