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Table 6. Number of genes not found in near-relatives associated with the 25 general COG functional categories*

From: Complete genome sequence of “Enterobacter lignolyticus” SCF1

Code Value Description
- 151 Hypothetical (no conserved gene family)
- 17 Transposase / Integrase (annotation-based)
- 80 Transport (annotation-based)
- 66 Signaling and Regulation
J 6 Translation
A 0 RNA processing and modification
K 51 Transcription
L 18 Replication, recombination and repair
B 0 Chromatin structure and dynamics
D 2 Cell cycle control, mitosis and meiosis
Y 0 Nuclear structure
V 7 Defense mechanisms
T 30 Signal transduction mechanisms
M 41 Cell wall/membrane biogenesis
N 20 Cell motility
Z 0 Cytoskeleton
W 1 Extracellular structures
U 22 Intracellular trafficking and secretion
O 9 Posttranslational modification, protein turnover, chaperones
C 20 Energy production and conversion
G 68 Carbohydrate transport and metabolism
E 28 Amino acid transport and metabolism
F 5 Nucleotide transport and metabolism
H 5 Coenzyme transport and metabolism
I 14 Lipid transport and metabolism
P 23 Inorganic ion transport and metabolism
Q 8 Secondary metabolites biosynthesis, transport and catabolism
R 43 General function prediction only
S 23 Function unknown
- 255 Not in COGs
  1. * Number of genes from set of 643 genes not found in near-relatives associated with the 25 general COG functional categories and several annotation-based classifications. Note that counts do not sum to 643 genes as a given gene is sometimes classified in more than one COG functional category.