Figure 3.

Sensitivity and specificity on binning contigs longer than 1,000 bps in the Phrap-assembled simMC dataset at the genus, family, order, and class levels using ClaMS in an ab initio manner. Complete genomes were used to train the 9 genera, 8 families/orders, and 6 classes specified by the user. Observe that a large amount of noise is added to the bins at the class level because of including all complete genomes in that class. The in-built taxonomy browser in ClaMS was used to make these bin selections.