Table 3. Nucleotide content and gene count levels of the genome
From: Complete genome sequence of Staphylothermus hellenicus P8T
Attribute | Value | % of totala |
|---|---|---|
Size (bp) | 1,580,437 | 100.0% |
G+C content (bp) | 582,173 | 36.8% |
Coding region (bp) | 1,383,053 | 87.5% |
Number of replicons | 1 | Â |
Extrachromosomal elements | 0 | Â |
Total genes | 1,716 | Â |
RNA genes | 48 | Â |
rRNA operons | 1 | Â |
Protein-coding genes | 1,668 | 100.0% |
Pseudogenes | 69 | 4.1% |
Genes with function prediction | 975 | 58.5% |
Genes in paralog clusters | 98 | 5.9% |
Genes assigned to COGs | 1,093 | 65.5% |
Genes assigned Pfam domains | 1,135 | 68.0% |
Genes with signal peptides | 129 | 7.7% |
Genes with transmembrane helices | 342 | 20.5% |
CRISPR repeats | 3 | % of totala |