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Table 3. Nucleotide content and gene count levels of the genome

From: Complete genome sequence of Staphylothermus hellenicus P8T

Attribute Value % of totala
Size (bp) 1,580,437 100.0%
G+C content (bp) 582,173 36.8%
Coding region (bp) 1,383,053 87.5%
Number of replicons 1  
Extrachromosomal elements 0  
Total genes 1,716  
RNA genes 48  
rRNA operons 1  
Protein-coding genes 1,668 100.0%
Pseudogenes 69 4.1%
Genes with function prediction 975 58.5%
Genes in paralog clusters 98 5.9%
Genes assigned to COGs 1,093 65.5%
Genes assigned Pfam domains 1,135 68.0%
Genes with signal peptides 129 7.7%
Genes with transmembrane helices 342 20.5%
CRISPR repeats 3 % of totala
  1. a) The total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome