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Table 4. Number of genes associated with the general COG functional categories

From: Complete genome sequence of Treponema succinifaciens type strain (6091T)

Code value %age Description
J 142 7.8 Translation, ribosomal structure and biogenesis
A 0 0.0 RNA processing and modification
K 120 6.6 Transcription
L 179 9.8 Replication, recombination and repair
B 0 0.0 Chromatin structure and dynamics
D 24 1.3 Cell cycle control, cell division, chromosome partitioning
Y 0 0.0 Nuclear structure
V 46 2.5 Defense mechanisms
T 103 5.7 Signal transduction mechanisms
M 120 6.6 Cell wall/membrane/envelope biogenesis
N 63 3.5 Cell motility
Z 1 0.0 Cytoskeleton
W 0 0.0 Extracellular structures
U 61 3.3 Intracellular trafficking, secretion, and vesicular transport
O 55 3.0 Posttranslational modification, protein turnover, chaperones
C 74 4.1 Energy production and conversion
G 111 6.1 Carbohydrate transport and metabolism
E 128 7.0 Amino acid transport and metabolism
F 62 3.4 Nucleotide transport and metabolism
H 58 3.2 Coenzyme transport and metabolism
I 34 1.9 Lipid transport and metabolism
P 60 3.3 Inorganic ion transport and metabolism
Q 5 0.3 Secondary metabolites biosynthesis, transport and catabolism
R 240 13.2 General function prediction only
S 138 7.6 Function unknown
- 1,112 39.9 Not in COGs