Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Haliscomenobacter hydrossis type strain (OT)
Code | value | % age | Description |
|---|---|---|---|
J | 171 | 4.0 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 349 | 8.2 | Transcription |
L | 190 | 4.4 | Replication, recombination and repair |
B | 2 | 0.1 | Chromatin structure and dynamics |
D | 26 | 0.6 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 146 | 3.4 | Defense mechanisms |
T | 291 | 6.8 | Signal transduction mechanisms |
M | 333 | 7.8 | Cell wall/membrane/envelope biogenesis |
N | 20 | 0.5 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 64 | 1.5 | Intracellular trafficking, secretion, and vesicular transport |
O | 161 | 3.8 | Posttranslational modification, protein turnover, chaperones |
C | 216 | 5.1 | Energy production and conversion |
G | 271 | 6.3 | Carbohydrate transport and metabolism |
E | 306 | 7.2 | Amino acid transport and metabolism |
F | 79 | 1.9 | Nucleotide transport and metabolism |
H | 150 | 3.5 | Coenzyme transport and metabolism |
I | 133 | 3.1 | Lipid transport and metabolism |
P | 254 | 5.9 | Inorganic ion transport and metabolism |
Q | 95 | 2.2 | Secondary metabolites biosynthesis, transport and catabolism |
R | 596 | 13.9 | General function prediction only |
S | 423 | 9.9 | Function unknown |
- | 3,013 | 43.6 | Not in COGs |