Table 2. Genome sequencing project information
From: Complete genome sequence of Haliscomenobacter hydrossis type strain (OT)
MIGS ID | Property | Term |
|---|---|---|
MIGS-31 | Finishing quality | Finished |
MIGS-28 | Libraries used | Four genomic libraries: 454 pyrosequence standard library, 454 PE libraries (8 kb and 13 kb insert size), one Illumina library |
MIGS-29 | Sequencing platforms | Illumina GAii, 454 GS FLX Titanium |
MIGS-31.2 | Sequencing coverage | 165.3 × Illumina; 38.5 × pyrosequence |
MIGS-30 | Assemblers | Newbler version 2.3, Velvet version 0.7.63, phrap version SPS - 4.24 |
MIGS-32 | Gene calling method | Prodigal 1.4, GenePRIMP |
CP002691 (chromosome) | ||
CP002692 (plasmid pHALHY01) | ||
CP002693 (plasmid pHALHY02) | ||
INSDC ID | CP002694 (plasmid pHALHY03) | |
Genbank Date of Release | May 9, 2011 | |
GOLD ID | Gc01752 | |
NCBI project ID | 48289 | |
Database: IMG-GEBA | 2504756004 | |
MIGS-13 | Source material identifier | DSM 1100 |
Project relevance | Tree of Life, GEBA |