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Table 2. Genome sequencing project information

From: Complete genome sequence of Tsukamurella paurometabola type strain (no. 33T)

MIGS ID

Property

Term

MIGS-31

Finishing quality

Finished

MIGS-28

Libraries used

Three genomic libraries: Sanger 8 kb pMCL200 library, 40 kb (fosmid, pcc1Fos) library, 454 pyrosequence standard library

MIGS-29

Sequencing platforms

ABI3730, 454 GS FLX Titanium

MIGS-31.2

Sequencing coverage

8.25 Ă— Sanger; 37.9 Ă— pyrosequence

MIGS-30

Assemblers

Newbler version 1.1.02.15, phrap

MIGS-32

Gene calling method

Prodigal 1.4, GenePRIMP

  

CP001966 (chromosome)

 

INSDC ID

CP001967 (plasmid Tpau01)

 

Genbank Date of Release

May 17, 2010

 

GOLD ID

Gc01341

 

NCBI project ID

29399

 

Database: IMG-GEBA

646564587

MIGS-13

Source material identifier

DSM 20162

 

Project relevance

Tree of Life, GEBA