Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Nitratifractor salsuginis type strain (E9I37-1T)
Code | value | %age | Description |
|---|---|---|---|
J | 149 | 9.0 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 64 | 3.9 | Transcription |
L | 114 | 6.9 | Replication, recombination and repair |
B | 0 | 0.0 | Chromatin structure and dynamics |
D | 20 | 1.2 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 25 | 1.5 | Defense mechanisms |
T | 69 | 4.2 | Signal transduction mechanisms |
M | 133 | 8.1 | Cell wall/membrane/envelope biogenesis |
N | 15 | 0.9 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 43 | 2.6 | Intracellular trafficking, secretion, and vesicular transport |
O | 89 | 5.4 | Posttranslational modification, protein turnover, chaperones |
C | 131 | 8.0 | Energy production and conversion |
G | 58 | 3.5 | Carbohydrate transport and metabolism |
E | 136 | 8.3 | Amino acid transport and metabolism |
F | 50 | 3.0 | Nucleotide transport and metabolism |
H | 97 | 5.9 | Coenzyme transport and metabolism |
I | 37 | 2.3 | Lipid transport and metabolism |
P | 81 | 4.9 | Inorganic ion transport and metabolism |
Q | 18 | 1.1 | Secondary metabolites biosynthesis, transport and catabolism |
R | 183 | 11.1 | General function prediction only |
S | 136 | 8.3 | Function unknown |
- | 650 | 29.9 | Not in COGs |