Table 3. Genome Statistics
From: Complete genome sequence of Cellulophaga lytica type strain (LIM-21T)
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 3,765,936 | 100.00% |
DNA coding region (bp) | 3,443,047 | 91.43% |
DNA G+C content (bp) | 1,209,276 | 32.11% |
Number of replicons | 1 | |
Extrachromosomal elements | 0 | |
Total genes | 3,358 | 100.00% |
RNA genes | 55 | 1.64% |
rRNA operons | 4 | |
Protein-coding genes | 3,303 | 98.36% |
Pseudo genes | 19 | 0.57% |
Genes with function prediction | 2,200 | 65.52% |
Genes in paralog clusters | 344 | 10.24% |
Genes assigned to COGs | 2,098 | 62.48% |
Genes assigned Pfam domains | 2,346 | 69.86% |
Genes with signal peptides | 1,005 | 29.93% |
Genes with transmembrane helices | 794 | 23.65% |
CRISPR repeats | 0 |