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Table 4. Number of genes associated with the general COG functional categories

From: Complete genome sequence of Oceanithermus profundus type strain (506T)

Code

value

%age

Description

J

150

7.7

Translation, ribosomal structure and biogenesis

A

1

0.0

RNA processing and modification

K

90

4.6

Transcription

L

91

4.7

Replication, recombination and repair

B

1

0.0

Chromatin structure and dynamics

D

27

1.4

Cell cycle control, cell division, chromosome partitioning

Y

0

0.0

Nuclear structure

V

31

1.6

Defense mechanisms

T

80

4.1

Signal transduction mechanisms

M

79

4.1

Cell wall/membrane/envelope biogenesis

N

23

1.2

Cell motility

Z

0

0.0

Cytoskeleton

W

0

0.0

Extracellular structures

U

47

2.4

Intracellular trafficking, secretion, and vesicular transport

O

82

4.2

Posttranslational modification, protein turnover, chaperones

C

154

7.9

Energy production and conversion

G

125

6.4

Carbohydrate transport and metabolism

E

203

10.4

Amino acid transport and metabolism

F

72

3.7

Nucleotide transport and metabolism

H

93

4.8

Coenzyme transport and metabolism

I

66

3.4

Lipid transport and metabolism

P

100

5.1

Inorganic ion transport and metabolism

Q

31

1.6

Secondary metabolites biosynthesis, transport and catabolism

R

244

12.5

General function prediction only

S

155

8.0

Function unknown

-

673

27.6

Not in COGs