Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Odoribacter splanchnicus type strain (1651/6T)
Code | value | %age | Description |
|---|---|---|---|
J | 149 | 5.9 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 188 | 7.5 | Transcription |
L | 161 | 6.4 | Replication, recombination and repair |
B | 0 | 0.0 | Chromatin structure and dynamics |
D | 23 | 0.9 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 67 | 2.7 | Defense mechanisms |
T | 144 | 5.7 | Signal transduction mechanisms |
M | 215 | 8.6 | Cell wall/membrane/envelope biogenesis |
N | 10 | 0.4 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 48 | 2.1 | Intracellular trafficking, secretion, and vesicular transport |
O | 134 | 5.3 | Posttranslational modification, protein turnover, chaperones |
C | 164 | 6.5 | Energy production and conversion |
G | 111 | 4.4 | Carbohydrate transport and metabolism |
E | 175 | 7.0 | Amino acid transport and metabolism |
F | 62 | 2.5 | Nucleotide transport and metabolism |
H | 126 | 5.2 | Coenzyme transport and metabolism |
I | 62 | 2.5 | Lipid transport and metabolism |
P | 216 | 8.6 | Inorganic ion transport and metabolism |
Q | 24 | 1.0 | Secondary metabolites biosynthesis, transport and catabolism |
R | 280 | 11.2 | General function prediction only |
S | 149 | 5.9 | Function unknown |
- | 1,494 | 39.9 | Not in COGs |