Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Bacteroides salanitronis type strain (BL78T)
Code | value | %age | Description |
|---|---|---|---|
J | 147 | 6.8 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 143 | 6.6 | Transcription |
L | 194 | 9.0 | Replication, recombination and repair |
B | 0 | 0.0 | Chromatin structure and dynamics |
D | 31 | 1.4 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 63 | 2.9 | Defense mechanisms |
T | 85 | 3.9 | Signal transduction mechanisms |
M | 193 | 8.9 | Cell wall/membrane/envelope biogenesis |
N | 5 | 0.2 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 61 | 2.8 | Intracellular trafficking, secretion, and vesicular transport |
O | 61 | 2.8 | Posttranslational modification, protein turnover, chaperones |
C | 105 | 4.9 | Energy production and conversion |
G | 174 | 8.0 | Carbohydrate transport and metabolism |
E | 134 | 6.2 | Amino acid transport and metabolism |
F | 68 | 3.1 | Nucleotide transport and metabolism |
H | 98 | 4.5 | Coenzyme transport and metabolism |
I | 62 | 2.9 | Lipid transport and metabolism |
P | 104 | 4.8 | Inorganic ion transport and metabolism |
Q | 29 | 1.3 | Secondary metabolites biosynthesis, transport and catabolism |
R | 285 | 13.2 | General function prediction only |
S | 125 | 5.8 | Function unknown |
- | 1,825 | 47.6 | Not in COGs |