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Table 6. Comparison of the genome of Vibrio tubiashii NCIMB 1337 with other sequenced Vibrios

From: Permanent draft genome sequence of Vibrio tubiashii strain NCIMB 1337 (ATCC19106)

Genome Name

Vibrio coralliilyticus ATCC BAA-450

Vibrio orientalis CIP 102891

Vibrio shilonii AK1

Vibrio tubiashii NCIMB 1337

Genes

5,144

4,297

5,438

4,950

RNA

122

128

78

86

w/Func Pred

3,687

3185

3,517

4,062

w/Func Pred %

71.68%

74.12%

64.67%

82.06%

Enzymes

1,143

1,058

1,258

1,116

Enzymes %

22.22%

24.62%

23.13%

22.55%

KEGG

1397

1,257

1,511

1,354

KEGG %

27.16%

29.25%

27.79%

27.35%

COG

3815

3,302

4,093

3,674

COG %

74.16%

76.84%

75.27%

74.22%

Pfam

4127

3,520

4,379

3,976

Pfam %

80.23%

81.92%

80.53%

80.32%

TIGRfam

1,643

1,515

1,708

1,651

TIGRfam %

31.94%

35.26%

31.41%

33.35%

Signal peptide

1,733

1,408

1,214

1,655

Signal peptide %

33.69%

32.77%

22.32%

33.43%

TransMb

1,227

1,018

1,326

1,167

TransMb Perc

23.85%

23.69%

24.38%

23.58%

Pfam Clusters

2,183

2,091

2,163

2,186

COG Clusters

2,030

1,943

2,087

2,041

TIGRfam Clusters

1,310

1,246

1,300

1,323

GC Perc

0.46

0.45

0.44

0.45

Bases

5,680,628

4698244

5,701,826

5,353,266