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Table 1. Classification and general features of V. tubiashii according to the MIGS recommendations

From: Permanent draft genome sequence of Vibrio tubiashii strain NCIMB 1337 (ATCC19106)

MIGS ID

Property

Term

Evidence code

 

Current classification

Domain Bacteria

TAS [10]

 

Phylum Proteobacteria

TAS [11]

 

Class Gammaproteobacteria

TAS [12,13]

 

Order Vibrionales

TAS [14]

 

Family Vibrionaceae

TAS [15,16]

 

Genus Vibrio

TAS [15,1719]

 

Species Vibrio tubiashii NCIMB 1337

TAS [4]

 

Gram stain

negative

IDA

 

Cell shape

Curved rods (vibroid)

IDA

 

Motility

motile via single polar flagellum

IDA

 

Sporulation

Non-sporulating

IDA

 

Temperature range

Mesophile 12–30°C

IDA

 

Optimum temperature

25°C

IDA

MIGS 6.3

Salinity

Slightly halophylic, optimum 1–3% NaCl

IDA

MIGS-22

Oxygen requirement

Aerobic/facultative anaerobic

IDA

 

Carbon source

Highly diverse

IDA

 

Energy source

Highly diverse

IDA

MIGS-6

Habitat

Marine invertebrates

TAS [20]

MIGS-16

Biotic relationship

Parasitic

TAS [3]

MIGS-14

Biosafety level

2

TAS [4]

 

Isolation

Moribund juvenile oyster (Crassostrea virginica)

TAS [3,4]

MIGS-4

Geographical location

Milford, Connecticut, USA

TAS [3]

MIGS-5

Sample collection time

01/02/1965

TAS [3]

MIGS 4.1

latitude

41.22 N

TAS [3]

MIGS 4.2

longitude

−73.06 W

TAS [3]

MIGS 4.3

Depth

Not reported

 

MIGS 4.4

Altitude

Marine

TAS [3]

  1. Evidence codes - IDA: Inferred from Direct Assay (first time in publication); TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [21]. If the evidence code is IDA, then the property was directly observed, for a live isolate by one of the authors, or an expert or reputable institution mentioned in the acknowledgements.