Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Desulfobulbus propionicus type strain (1pr3T)
Code | value | %age | Description |
|---|---|---|---|
J | 155 | 5.6 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.1 | RNA processing and modification |
K | 128 | 4.6 | Transcription |
L | 154 | 5.6 | Replication, recombination and repair |
B | 5 | 0.2 | Chromatin structure and dynamics |
D | 28 | 1.0 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 45 | 1.6 | Defense mechanisms |
T | 297 | 10.8 | Signal transduction mechanisms |
M | 184 | 6.7 | Cell wall/membrane/envelope biogenesis |
N | 106 | 3.8 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 83 | 3.0 | Intracellular trafficking and secretion, and vesicular transport |
O | 106 | 3.8 | Posttranslational modification, protein turnover, chaperones |
C | 274 | 9.9 | Energy production and conversion |
G | 96 | 3.5 | Carbohydrate transport and metabolism |
E | 185 | 6.7 | Amino acid transport and metabolism |
F | 66 | 2.4 | Nucleotide transport and metabolism |
H | 145 | 5.3 | Coenzyme transport and metabolism |
I | 74 | 2.7 | Lipid transport and metabolism |
P | 123 | 4.5 | Inorganic ion transport and metabolism |
Q | 40 | 1.5 | Secondary metabolites biosynthesis, transport and catabolism |
R | 274 | 9.9 | General function prediction only |
S | 195 | 7.1 | Function unknown |
- | 906 | 26.6 | Not in COGs |