Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Weeksella virosa type strain (9751T)
Code | value | %age | Description |
|---|---|---|---|
J | 142 | 9.5 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 54 | 3.6 | Transcription |
L | 94 | 6.3 | Replication, recombination and repair |
B | 0 | 0.0 | Chromatin structure and dynamics |
D | 18 | 1.2 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 29 | 1.9 | Defense mechanisms |
T | 29 | 1.9 | Signal transduction mechanisms |
M | 154 | 10.3 | Cell wall/membrane/envelope biogenesis |
N | 4 | 0.3 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 25 | 1.7 | Intracellular trafficking, secretion, and vesicular transport |
O | 73 | 4.9 | Posttranslational modification, protein turnover, chaperones |
C | 82 | 5.5 | Energy production and conversion |
G | 47 | 3.1 | Carbohydrate transport and metabolism |
E | 127 | 8.5 | Amino acid transport and metabolism |
F | 57 | 3.8 | Nucleotide transport and metabolism |
H | 95 | 6.3 | Coenzyme transport and metabolism |
I | 72 | 4.8 | Lipid transport and metabolism |
P | 101 | 6.7 | Inorganic ion transport and metabolism |
Q | 24 | 1.6 | Secondary metabolites biosynthesis, transport and catabolism |
R | 171 | 11.4 | General function prediction only |
S | 103 | 6.9 | Function unknown |
- | 778 | 35.7 | Not in COGs |