Table 2. Genome sequencing project information
From: Complete genome sequence of Isosphaera pallida type strain (IS1BT)
MIGS ID | Property | Term |
|---|---|---|
MIGS-31 | Finishing quality | Finished |
MIGS-28 | Libraries used | Three genomic libraries: one 454 pyrosequence standard library, one 454 PE library (11 kb insert size), one Illumina library |
MIGS-29 | Sequencing platforms | Illumina GAii, 454 GS FLX Titanium |
MIGS-31.2 | Sequencing coverage | 109.5 Ă— Illumina; 31.2 Ă— pyrosequence |
MIGS-30 | Assemblers | Newbler version 2.0.00.20-PostRelease-11-05-2008-gcc-3.4.6, Velvet, phrap |
MIGS-32 | Gene calling method | Prodigal 1.4, GenePRIMP |
| Â | INSDC ID | CP002353 (chromosome) |
| Â | CP002354 (plasmid) | |
| Â | Genbank Date of Release | January 26, 2011 |
| Â | GOLD ID | Gc01591 |
| Â | NCBI project ID | 32825 |
| Â | Database: IMG-GEBA | 2503538023 |
MIGS-13 | Source material identifier | ATCC 43644 |
| Â | Project relevance | Tree of Life, GEBA |