Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Calditerrivibrio nitroreducens type strain (Yu37-1T)
Code | value | %age | Description |
|---|---|---|---|
J | 141 | 7.4 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 78 | 4.1 | Transcription |
L | 96 | 5.0 | Replication, recombination and repair |
B | 1 | 0.1 | Chromatin structure and dynamics |
D | 22 | 1.2 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 34 | 1.8 | Defense mechanisms |
T | 139 | 7.3 | Signal transduction mechanisms |
M | 145 | 7.6 | Cell wall/membrane/envelope biogenesis |
N | 81 | 4.3 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 68 | 3.6 | Intracellular trafficking and secretion, and vesicular transport |
O | 84 | 4.4 | Posttranslational modification, protein turnover, chaperones |
C | 145 | 7.6 | Energy production and conversion |
G | 67 | 3.5 | Carbohydrate transport and metabolism |
E | 142 | 7.5 | Amino acid transport and metabolism |
F | 53 | 2.8 | Nucleotide transport and metabolism |
H | 112 | 5.9 | Coenzyme transport and metabolism |
I | 58 | 3.0 | Lipid transport and metabolism |
P | 87 | 4.6 | Inorganic ion transport and metabolism |
Q | 25 | 1.3 | Secondary metabolites biosynthesis, transport and catabolism |
R | 214 | 11.2 | General function prediction only |
S | 113 | 5.9 | Function unknown |
- | 447 | 20.5 | Not in COGs |