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Table 2. Genome sequencing project information

From: Complete genome sequence of Calditerrivibrio nitroreducens type strain (Yu37-1T)

MIGS ID

Property

Term

MIGS-31

Finishing quality

Finished

MIGS-28

Libraries used

Tree genomic libraries: one 454 pyrosequence standard library, one 454 PE library (7 kb insert size), one Illumina library

MIGS-29

Sequencing platforms

Illumina GAii, 454 GS FLX Titanium

MIGS-31.2

Sequencing coverage

150.7 Ă— Illumina; 68.8 Ă— pyrosequence

MIGS-30

Assemblers

Newbler version 2.5-internal-10Apr08-1-threads, Velvet, phrap

MIGS-32

Gene calling method

Prodigal 1.4, GenePRIMP

 

INSDC ID

CP002347 (chromosome)

 

CP002348 (plasmid)

 

Genbank Date of Release

December 7, 2010

 

GOLD ID

Gc01554

 

NCBI project ID

49523

 

Database: IMG-GEBA

2503707001

MIGS-13

Source material identifier

DSM 19672

 

Project relevance

Tree of Life, GEBA