Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Bacteroides helcogenes type strain (P 36–108T)
Code | value | %age | Description |
|---|---|---|---|
J | 147 | 6.5 | Translation, ribosomal structure and biogenesis |
A | 0 | 0 | RNA processing and modification |
K | 157 | 6.9 | Transcription |
L | 125 | 5.5 | Replication, recombination and repair |
B | 0 | 0 | Chromatin structure and dynamics |
D | 20 | 0.9 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0 | Nuclear structure |
V | 67 | 2.9 | Defense mechanisms |
T | 125 | 5.5 | Signal transduction mechanisms |
M | 245 | 10.8 | Cell wall/membrane/envelope biogenesis |
N | 5 | 0.2 | Cell motility |
Z | 0 | 0 | Cytoskeleton |
W | 0 | 0 | Extracellular structures |
U | 48 | 2.1 | Intracellular trafficking, secretion, and vesicular transport |
O | 66 | 2.9 | Posttranslational modification, protein turnover, chaperones |
C | 120 | 5.3 | Energy production and conversion |
G | 185 | 8.1 | Carbohydrate transport and metabolism |
E | 149 | 6.5 | Amino acid transport and metabolism |
F | 67 | 2.9 | Nucleotide transport and metabolism |
H | 120 | 5.3 | Coenzyme transport and metabolism |
I | 64 | 2.8 | Lipid transport and metabolism |
P | 161 | 7.6 | Inorganic ion transport and metabolism |
Q | 20 | 0.9 | Secondary metabolites biosynthesis, transport and catabolism |
R | 266 | 11.7 | General function prediction only |
S | 122 | 5.4 | Function unknown |
- | 1,333 | 38.8 | Not in COGs |