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Table 4. Number of genes associated with the general COG functional categories.

From: Complete genome sequence of “Thioalkalivibrio sulfidophilus” HL-EbGr7

Code

value

%age

COG category

E

180

6.39

Amino acid transport and metabolism

G

94

3.34

Carbohydrate transport and metabolism

D

49

1.74

Cell cycle control, cell, division, chromosome partitioning

N

109

3.87

Cell motility

M

199

7.06

Cell wall/membrane/envelope biogenesis

B

2

0.07

Chromatin structure and dynamics

H

139

4.93

Coenzyme transport and metabolism

Z

0

0

Cytoskeleton

V

37

1.31

Defense mechanism

C

184

6.53

Energy production and conversion

W

0

0

Extracellular structures

S

270

9.58

Function unknown

R

310

11.00

General function prediction only

P

152

5.39

Inorganic ion transport and metabolism

U

117

4.15

Intracellular trafficking, secretion, and vesicular transport

I

70

2.48

Lipid transport and metabolism

Y

0

0

Nuclear structure

F

58

2.06

Nucleotide transport and metabolism

O

142

5.04

Posttranslational modification, protein turnover, chaperones

A

2

0.07

RNA processing and modification

L

145

5.15

Replication, recombination and repair

Q

47

1.67

Secondary metabolites biosynthesis, transport and catabolism

T

216

7.67

Signal transduction mechanisms

K

134

4.76

Transcription

J

162

5.75

Translation, ribosomal structure and biogenesis

-

854

25.37

Not in COGs