Skip to main content

Table 5. Comparison of Genome Statistics

From: Complete genome sequence of Hydrogenobacter thermophilus type strain (TK-6T)

Attribute DSM 6534 U of Tokyo difference
Genome size (bp) 1,742,932 1,744,135 +1,203
DNA coding region (bp) 1,666,175 1,669,712 +3,537
DNA G+C content (bp) 766,905 766,984 +79
Number of replicons 1 1 1
Extrachromosomal elements 0 0 0
Total genes 1,948 1,941 −7
RNA genes 49 48 −1
rRNA operons 1 1 1
Protein-coding genes 1,899 1,893 −6
Pseudo genes 30 0 −30
Genes with function prediction 1,361 1,349 −12
Genes in paralog clusters 183 175 −8
Genes assigned to COGs 1,441 1,430 −11
Genes assigned Pfam domains 1,501 1,489 −12
Genes with signal peptides 287 528 +241
Genes with transmembrane helices 381 385 +4
CRISPR repeats 1 2 +1