From: Complete genome sequence of Hydrogenobacter thermophilus type strain (TK-6T)
Attribute | DSM 6534 | U of Tokyo | difference |
---|---|---|---|
Genome size (bp) | 1,742,932 | 1,744,135 | +1,203 |
DNA coding region (bp) | 1,666,175 | 1,669,712 | +3,537 |
DNA G+C content (bp) | 766,905 | 766,984 | +79 |
Number of replicons | 1 | 1 | 1 |
Extrachromosomal elements | 0 | 0 | 0 |
Total genes | 1,948 | 1,941 | −7 |
RNA genes | 49 | 48 | −1 |
rRNA operons | 1 | 1 | 1 |
Protein-coding genes | 1,899 | 1,893 | −6 |
Pseudo genes | 30 | 0 | −30 |
Genes with function prediction | 1,361 | 1,349 | −12 |
Genes in paralog clusters | 183 | 175 | −8 |
Genes assigned to COGs | 1,441 | 1,430 | −11 |
Genes assigned Pfam domains | 1,501 | 1,489 | −12 |
Genes with signal peptides | 287 | 528 | +241 |
Genes with transmembrane helices | 381 | 385 | +4 |
CRISPR repeats | 1 | 2 | +1 |