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Table 5. Comparison of Genome Statistics

From: Complete genome sequence of Hydrogenobacter thermophilus type strain (TK-6T)

Attribute

DSM 6534

U of Tokyo

difference

Genome size (bp)

1,742,932

1,744,135

+1,203

DNA coding region (bp)

1,666,175

1,669,712

+3,537

DNA G+C content (bp)

766,905

766,984

+79

Number of replicons

1

1

1

Extrachromosomal elements

0

0

0

Total genes

1,948

1,941

−7

RNA genes

49

48

−1

rRNA operons

1

1

1

Protein-coding genes

1,899

1,893

−6

Pseudo genes

30

0

−30

Genes with function prediction

1,361

1,349

−12

Genes in paralog clusters

183

175

−8

Genes assigned to COGs

1,441

1,430

−11

Genes assigned Pfam domains

1,501

1,489

−12

Genes with signal peptides

287

528

+241

Genes with transmembrane helices

381

385

+4

CRISPR repeats

1

2

+1