Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Thermomonospora curvata type strain (B9T)
Code | value | %age | Description |
|---|---|---|---|
J | 169 | 4.5 | Translation, ribosomal structure and biogenesis |
A | 2 | 0.1 | RNA processing and modification |
K | 382 | 10.1 | Transcription |
L | 174 | 4.6 | Replication, recombination and repair |
B | 1 | 0.0 | Chromatin structure and dynamics |
D | 41 | 1.1 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 68 | 1.8 | Defense mechanisms |
T | 270 | 7.2 | Signal transduction mechanisms |
M | 159 | 4.2 | Cell wall/membrane/envelope biogenesis |
N | 2 | 0.1 | Cell motility |
Z | 2 | 0.1 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 38 | 1.0 | Intracellular trafficking and secretion, and vesicular transport |
O | 134 | 3.6 | Posttranslational modification, protein turnover, chaperones |
C | 256 | 6.8 | Energy production and conversion |
G | 193 | 5.1 | Carbohydrate transport and metabolism |
E | 292 | 7.7 | Amino acid transport and metabolism |
F | 78 | 2.1 | Nucleotide transport and metabolism |
H | 161 | 4.3 | Coenzyme transport and metabolism |
I | 265 | 6.8 | Lipid transport and metabolism |
P | 160 | 4.2 | Inorganic ion transport and metabolism |
Q | 181 | 4.8 | Secondary metabolites biosynthesis, transport and catabolism |
R | 511 | 13.5 | General function prediction only |
S | 243 | 6.4 | Function unknown |
- | 1,787 | 35.3 | Not in COGs |