Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Thermaerobacter marianensis type strain (7p75aT)
Code | value | % age | Description |
|---|---|---|---|
J | 140 | 6.8 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 126 | 6.1 | Transcription |
L | 99 | 4.8 | Replication, recombination and repair |
B | 0 | 0.0 | Chromatin structure and dynamics |
D | 29 | 1.4 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 34 | 1.7 | Defense mechanisms |
T | 79 | 3.8 | Signal transduction mechanisms |
M | 101 | 4.9 | Cell wall/membrane/envelope biogenesis |
N | 49 | 2.4 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 49 | 2.4 | Intracellular trafficking, secretion, and vesicular transport |
O | 73 | 3.5 | Posttranslational modification, protein turnover, chaperones |
C | 133 | 6.4 | Energy production and conversion |
G | 108 | 5.2 | Carbohydrate transport and metabolism |
E | 264 | 12.8 | Amino acid transport and metabolism |
F | 63 | 3.1 | Nucleotide transport and metabolism |
H | 96 | 4.7 | Coenzyme transport and metabolism |
I | 71 | 3.4 | Lipid transport and metabolism |
P | 108 | 5.2 | Inorganic ion transport and metabolism |
Q | 44 | 2.1 | Secondary metabolites biosynthesis, transport and catabolism |
R | 233 | 11.3 | General function prediction only |
S | 166 | 8.0 | Function unknown |
- | 565 | 23.2 | Not in COGs |