Table 4. Number of genes associated with the 21 general COG functional categories
From: Complete genome sequence of Desulfomicrobium baculatum type strain (XT)
Code | Value | % | Description |
|---|---|---|---|
J | 166 | 4.8 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 154 | 4.4 | Transcription |
L | 116 | 3.3 | Replication, recombination and repair |
B | 3 | 0.1 | Chromatin structure and dynamics |
D | 35 | 1.0 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.0 | Nuclear structure |
V | 38 | 1.1 | Defense mechanisms |
T | 325 | 9.3 | Signal transduction mechanisms |
M | 221 | 6.3 | Cell wall/membrane biogenesis |
N | 108 | 3.1 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 82 | 2.3 | Intracellular trafficking and secretion |
O | 122 | 3.5 | Posttranslational modification, protein turnover, chaperones |
C | 241 | 6.9 | Energy production and conversion |
G | 126 | 3.6 | Carbohydrate transport and metabolism |
E | 266 | 7.6 | Amino acid transport and metabolism |
F | 68 | 1.9 | Nucleotide transport and metabolism |
H | 135 | 3.9 | Coenzyme transport and metabolism |
I | 52 | 1.5 | Lipid transport and metabolism |
P | 137 | 3.9 | Inorganic ion transport and metabolism |
Q | 34 | 1.0 | Secondary metabolites biosynthesis, transport and catabolism |
R | 319 | 9.1 | General function prediction only |
S | 221 | 6.3 | Function unknown |
- | 805 | 23.0 | Not in COGs |