Table 4. Number of genes associated with the general COG functional categories
From: Non-contiguous finished genome sequence of Aminomonas paucivorans type strain (GLU-3T)
Code | value | %age | Description |
|---|---|---|---|
J | 158 | 7.2 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 138 | 6.3 | Transcription |
L | 107 | 4.9 | Replication, recombination and repair |
B | 0 | 0.0 | Chromatin structure and dynamics |
D | 29 | 1.3 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 33 | 1.5 | Defense mechanisms |
T | 154 | 7.0 | Signal transduction mechanisms |
M | 123 | 5.6 | Cell wall/membrane/envelope biogenesis |
N | 90 | 4.1 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 48 | 2.2 | Intracellular trafficking, secretion, and vesicular transport |
O | 64 | 2.9 | Posttranslational modification, protein turnover, chaperones |
C | 161 | 7.3 | Energy production and conversion |
G | 104 | 4.7 | Carbohydrate transport and metabolism |
E | 251 | 11.4 | Amino acid transport and metabolism |
F | 71 | 3.2 | Nucleotide transport and metabolism |
H | 111 | 5.0 | Coenzyme transport and metabolism |
I | 35 | 1.6 | Lipid transport and metabolism |
P | 102 | 4.6 | Inorganic ion transport and metabolism |
Q | 25 | 1.1 | Secondary metabolites biosynthesis, transport and catabolism |
R | 236 | 10.7 | General function prediction only |
S | 166 | 7.5 | Function unknown |
- | 506 | 20.3 | Not in COGs |