Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Cryptobacterium curtum type strain (12-3T)
Code | Value | % | Description |
|---|---|---|---|
J | 128 | 9.4 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.1 | RNA processing and modification |
K | 94 | 6.9 | Transcription |
L | 74 | 5.5 | Replication, recombination and repair |
B | 1 | 0.1 | Chromatin structure and dynamics |
D | 15 | 1.1 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.0 | Nuclear structure |
V | 20 | 1.5 | Defense mechanisms |
T | 64 | 4.7 | Signal transduction mechanisms |
M | 70 | 5.1 | Cell wall/membrane biogenesis |
N | 1 | 0.1 | Cell motility |
Z | 1 | 0.1 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 20 | 1.5 | Intracellular trafficking and secretion |
O | 55 | 4.0 | Posttranslational modification, protein turnover, chaperones |
C | 100 | 7.3 | Energy production and conversion |
G | 41 | 3.0 | Carbohydrate transport and metabolism |
E | 96 | 7.0 | Amino acid transport and metabolism |
F | 47 | 3.4 | Nucleotide transport and metabolism |
H | 69 | 5.1 | Coenzyme transport and metabolism |
I | 39 | 2.9 | Lipid transport and metabolism |
P | 70 | 5.1 | Inorganic ion transport and metabolism |
Q | 9 | 0.7 | Secondary metabolites biosynthesis, transport and catabolism |
R | 119 | 8.7 | General function prediction only |
S | 81 | 5.9 | Function unknown |
- | 261 | 19.1 | Not in COGs |