Metagenomes and metatranscriptomes from the L4 long-term coastal monitoring station in the Western English Channel

Table 8. Number of transcripts associated with the general SEED functional categories

Subsystem Hierarchy 1	Jan 3:30pm	Jan 7pm	April 4pm	April 10pm	Aug 27 4pm	Aug 27 10pm	Aug 28 4am
Amino Acids and Derivatives	261	536	204	198	21	144	443
Carbohydrates	886	1767	546	1302	530	1381	1256
Cell Division and Cell Cycle	83	191	52	63	96	56	80
Cell Wall and Capsule	154	353	317	297	153	113	221
Clustering-based subsystems	641	657	294	451	111	157	427
Cofactors, Vitamins, Prosthetic Groups, Pigments	215	457	130	248	24	13	469
DNA Metabolism	102	108	83	122	24	26	85
Fatty Acids and Lipids	84	28	17	27	0	28	10
Macromolecular Synthesis	0	0	5	2	2	0	0
Membrane Transport	44	19	237	83	2673	13	440
Metabolism of Aromatic Compounds	47	6	16	4	0	24	14
Miscellaneous	53	80	54	55	672	43	75
Motility and Chemotaxis	40	10	438	58	3	8	180
Nitrogen Metabolism	11	0	0	2	9	8	3
Nucleosides and Nucleotides	144	87	42	48	4	13	56
Phosphorus Metabolism	79	83	64	94	25	18	31
Photosynthesis	67	0	17	2	0	1	0
Potassium metabolism	29	13	3	13	4	2	7
Protein Metabolism	439	95	129	625	81	112	172
RNA Metabolism	1631	160	1813	702	907	2883	874
Regulation and Cell signaling	65	136	16	354	30	18	41
Respiration	174	20	26	97	125	31	109
Secondary Metabolism	18	3	1	0	0	0	1
Stress Response	100	175	42	229	5	43	56
Sulfur Metabolism	42	18	19	14	13	11	40
Unclassified	346	58	957	101	10	110	271
Virulence	152	847	385	716	385	651	546

ISSN: 2524-6372