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Table 1. Classification and general feature of 8 metagenome datasets according to the MIMS recommendations [5].

From: Metagenomes and metatranscriptomes from the L4 long-term coastal monitoring station in the Western English Channel

MIGS ID

Property

Term

Evidence code

 

Current classification

Metagenome ecological metagenome marine metagenome

TAS [6]

5

Collection date

Jan Day: 2008-01-28T15:30

TAS [6]

Jan Night: 2008-01-28T19:00

Apr Day: 2008-04-22T16:00

Apr Night: 2008

Aug 4pm: 2008

Aug 10 pm: 2008

Aug 4 am: 2008

Aug 10 am: 2008

6

Latitude Longitude

Jan Day: 50.2518:4.2089

NAS

Jan Night: 50.2611:4.2435

Apr Day: 50.2518:4.2089

Apr Night: 50.2530:4.1875

Aug 4pm: 50.2518:4.2089

Aug 10 pm: 50.2545:4.1990

Aug 4 am: 50.2678:4.1990

Aug 10 am: 50.2665:4.1486

7

Depth

0

NAS

8

Altitude

0

NAS

9

Geographic location/Country

England

NAS

10

Environment

Coastal Marine

 

11a

Environmental Package

See Table 2

 

29

Sample collection device or method

Large bore peristaltic filtration pump

 

30

Sample material processing

Water filtered on to a 0.22 µm Sterivex (Millipore) filter and then snap-frozen at −80C

 

31

Amount or size of sample collected

10L

 
  1. Evidence codes - IDA: Inferred from Direct Assay (first time in publication); TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [7]. If the evidence code is IDA, then the property was directly observed for a live isolate by one of the authors or an expert mentioned in the acknowledgements.