Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Sulfurimonas autotrophica type strain (OK10T)
Code | value | %age | Description |
|---|---|---|---|
J | 143 | 8.1 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 70 | 4.0 | Transcription |
L | 82 | 4.6 | Replication, recombination and repair |
B | 0 | 0.0 | Chromatin structure and dynamics |
D | 22 | 1.2 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 30 | 1.7 | Defense mechanisms |
T | 158 | 8.9 | Signal transduction mechanisms |
M | 126 | 7.1 | Cell wall/membrane/envelope biogenesis |
N | 77 | 4.3 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 69 | 3.9 | Intracellular trafficking and secretion |
O | 89 | 5.0 | Posttranslational modification, protein turnover, chaperones |
C | 141 | 8.0 | Energy production and conversion |
G | 62 | 3.5 | Carbohydrate transport and metabolism |
E | 121 | 6.8 | Amino acid transport and metabolism |
F | 49 | 2.8 | Nucleotide transport and metabolism |
H | 107 | 6.0 | Coenzyme transport and metabolism |
I | 36 | 2.0 | Lipid transport and metabolism |
P | 103 | 5.8 | Inorganic ion transport and metabolism |
Q | 12 | 0.7 | Secondary metabolites biosynthesis, transport and catabolism |
R | 158 | 8.9 | General function prediction only |
S | 119 | 6.7 | Function unknown |
- | 630 | 28.4 | Not in COGs |