Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Ferrimonas balearica type strain (PATT)
Code | value | %age | Description |
|---|---|---|---|
J | 189 | 5.8 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.0 | RNA processing and modification |
K | 213 | 6.5 | Transcription |
L | 138 | 4.2 | Replication, recombination and repair |
B | 1 | 0.0 | Chromatin structure and dynamics |
D | 35 | 1.1 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 61 | 1.9 | Defense mechanisms |
T | 178 | 5.5 | Signal transduction mechanisms |
M | 219 | 6.7 | Cell wall/membrane/envelope biogenesis |
N | 133 | 4.1 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 128 | 3.9 | Intracellular trafficking and secretion, and vesicular transport |
O | 155 | 4.8 | Posttranslational modification, protein turnover, chaperones |
C | 238 | 7.3 | Energy production and conversion |
G | 105 | 3.2 | Carbohydrate transport and metabolism |
E | 248 | 7.6 | Amino acid transport and metabolism |
F | 85 | 2.6 | Nucleotide transport and metabolism |
H | 167 | 5.1 | Coenzyme transport and metabolism |
I | 99 | 3.0 | Lipid transport and metabolism |
P | 184 | 6.7 | Inorganic ion transport and metabolism |
Q | 53 | 1.6 | Secondary metabolites biosynthesis, transport and catabolism |
R | 338 | 10.4 | General function prediction only |
S | 287 | 8.8 | Function unknown |
- | 1,018 | 25.8 | Not in COGs |