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Table 4. Number of genes associated with the general COG functional categories

From: Complete genome sequence of Thermosediminibacter oceani type strain (JW/IW-1228PT)

Code Value %age Description
J 140 7.3 Translation, ribosomal structure and biogenesis
A 0 0.0 RNA processing and modification
K 122 6.4 Transcription
L 191 10.0 Replication, recombination and repair
B 1 0.1 Chromatin structure and dynamics
D 35 1.8 Cell cycle control, cell division, chromosome partitioning
Y 0 0.0 Nuclear structure
V 28 1.5 Defense mechanisms
T 96 5.0 Signal transduction mechanisms
M 107 5.6 Cell wall/membrane/envelope biogenesis
N 58 3.0 Cell motility
Z 0 0.0 Cytoskeleton
W 0 0.0 Extracellular structures
U 49 2.6 Intracellular trafficking and secretion, and vesicular transport
O 58 3.0 Posttranslational modification, protein turnover, chaperones
C 142 7.4 Energy production and conversion
G 117 6.1 Carbohydrate transport and metabolism
E 147 7.7 Amino acid transport and metabolism
F 51 2.7 Nucleotide transport and metabolism
H 94 4.9 Coenzyme transport and metabolism
I 33 1.7 Lipid transport and metabolism
P 85 4.5 Inorganic ion transport and metabolism
Q 25 1.3 Secondary metabolites biosynthesis, transport and catabolism
R 171 9.0 General function prediction only
S 158 8.3 Function unknown
- 597 25.4 Not in COGs