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Table 4. Number of genes associated with the general COG functional categories

From: Complete genome sequence of Thermosediminibacter oceani type strain (JW/IW-1228PT)

Code

Value

%age

Description

J

140

7.3

Translation, ribosomal structure and biogenesis

A

0

0.0

RNA processing and modification

K

122

6.4

Transcription

L

191

10.0

Replication, recombination and repair

B

1

0.1

Chromatin structure and dynamics

D

35

1.8

Cell cycle control, cell division, chromosome partitioning

Y

0

0.0

Nuclear structure

V

28

1.5

Defense mechanisms

T

96

5.0

Signal transduction mechanisms

M

107

5.6

Cell wall/membrane/envelope biogenesis

N

58

3.0

Cell motility

Z

0

0.0

Cytoskeleton

W

0

0.0

Extracellular structures

U

49

2.6

Intracellular trafficking and secretion, and vesicular transport

O

58

3.0

Posttranslational modification, protein turnover, chaperones

C

142

7.4

Energy production and conversion

G

117

6.1

Carbohydrate transport and metabolism

E

147

7.7

Amino acid transport and metabolism

F

51

2.7

Nucleotide transport and metabolism

H

94

4.9

Coenzyme transport and metabolism

I

33

1.7

Lipid transport and metabolism

P

85

4.5

Inorganic ion transport and metabolism

Q

25

1.3

Secondary metabolites biosynthesis, transport and catabolism

R

171

9.0

General function prediction only

S

158

8.3

Function unknown

-

597

25.4

Not in COGs