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Table 4. Number of genes associated with the general COG functional categories

From: Complete genome sequence of Candidatus Ruthia magnifica

Code Value %age Description
J 137 13.50 Translation, ribosomal structure and biogenesis
A 1 0.10 RNA processing and modification
K 32 3.15 Transcription
L 61 6.01 Replication, recombination and repair
B 0 0.0 Chromatin structure and dynamics
D 13 1.28 Cell cycle control, mitosis and meiosis
Y 0 0.0 Nuclear structure
V 9 0.89 Defense mechanisms
T 17 1.67 Signal transduction mechanisms
M 73 7.19 Cell wall/membrane biogenesis
N 0 0.0 Cell motility
Z 0 0.0 Cytoskeleton
W 0 0.0 Extracellular structures
U 24 2.36 Intracellular trafficking and secretion
O 74 7.29 Posttranslational modification, protein turnover, chaperones
C 90 8.87 Energy production and conversion
G 31 3.05 Carbohydrate transport and metabolism
E 99 9.75 Amino acid transport and metabolism
F 39 3.84 Nucleotide transport and metabolism
H 94 9.26 Coenzyme transport and metabolism
I 36 3.55 Lipid transport and metabolism
P 45 4.43 Inorganic ion transport and metabolism
Q 11 1.08 Secondary metabolites biosynthesis, transport and catabolism
R 77 7.59 General function prediction only
S 52 5.12 Functions unknown
- 186 16.64 Not in COGs
  1. a) The total is based on the total number of protein coding genes in the annotated genome.