Table 3. Nucleotide content and gene count levels of the genome
From: Complete genome sequence of Candidatus Ruthia magnifica
Attribute | Value | Totala |
|---|---|---|
Genome size (bp) | 1160782 | 100 |
DNA G+C content (bp) | 395054 | 34.0 |
DNA coding region (bp) | 976503 | 84.1 |
Total genesb | 1118 | 100 |
RNA genes | 42 | 3.8 |
rRNA genes | 3 | 0.3 |
tRNA genes | 36 | 3.2 |
Other RNA genes | 3 | 0.3 |
Protein-coding genes | 1076 | 96.2 |
Protein coding genes with function prediction | 837 | 74.9 |
Genes in paralog clusters | 243 | 21.7 |
Protein coding genes connected to KEGG pathways | 496 | 44.4 |
Genes assigned to COGs | 932 | 83.4 |
Genes with signal peptides | 131 | 11.7 |
Genes with transmembrane helices | 224 | 20.0 |
CRISPR repeats | 0 | 0 |