Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Olsenella uli type strain (VPI D76D-27CT)
Code | value | %age | Description |
|---|---|---|---|
J | 137 | 8.9 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 140 | 9.1 | Transcription |
L | 82 | 5.3 | Replication, recombination and repair |
B | 1 | 0.1 | Chromatin structure and dynamics |
D | 17 | 1.1 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 44 | 2.9 | Defense mechanisms |
T | 72 | 4.7 | Signal transduction mechanisms |
M | 86 | 5.6 | Cell wall/membrane/envelope biogenesis |
N | 0 | 0.0 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 18 | 1.2 | Intracellular trafficking, secretion, and vesicular transport |
O | 51 | 3.3 | Posttranslational modification, protein turnover, chaperones |
C | 75 | 4.9 | Energy production and conversion |
G | 165 | 10.7 | Carbohydrate transport and metabolism |
E | 150 | 9.7 | Amino acid transport and metabolism |
F | 56 | 3.6 | Nucleotide transport and metabolism |
H | 46 | 3.0 | Coenzyme transport and metabolism |
I | 32 | 2.1 | Lipid transport and metabolism |
P | 66 | 4.3 | Inorganic ion transport and metabolism |
Q | 24 | 1.6 | Secondary metabolites biosynthesis, transport and catabolism |
R | 172 | 11.1 | General function prediction only |
S | 112 | 7.2 | Function unknown |
- | 438 | 23.7 | Not in COGs |