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Figure 2. | Standards in Genomic Sciences

Figure 2.

From: Complete genome sequence of Olsenella uli type strain (VPI D76D-27CT)

Figure 2.

Phylogenetic tree highlighting the position of O. uli VPI D76D-27CT relative to the type strains within the genus and the type strains of the other genera within the family Coriobacteriaceae. The trees were inferred from 1,408 aligned characters [24,25] of the 16S rRNA gene sequence under the maximum likelihood criterion [26] and as far as possible (note: Olsenella is paraphyletic in this tree) rooted in accordance with the current taxonomy [27]. The branches are scaled in terms of the expected number of substitutions per site. Numbers above branches are support values from 250 bootstrap replicates [28] if larger than 60%. Lineages with type strain genome sequencing projects registered in GOLD [29] are shown in blue, published genomes in bold [30,31]. Adding the 16S rRNA sequence of the type strain of the not yet validly published species ‘Olsenella umbonata’ (FN178463) to the tree (data not shown) did not change the overall arrangement; ‘O. umbonata’ appeared within the grade between O. uli and O. profusa.

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