Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Cellulomonas flavigena type strain (134T)
Code | value | %age | Description |
|---|---|---|---|
J | 165 | 5.8 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 270 | 9.5 | Transcription |
L | 146 | 5.2 | Replication, recombination and repair |
B | 1 | 0.0 | Chromatin structure and dynamics |
D | 24 | 0.9 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.0 | Nuclear structure |
V | 64 | 2.3 | Defense mechanisms |
T | 155 | 5.5 | Signal transduction mechanisms |
M | 146 | 5.2 | Cell wall/membrane biogenesis |
N | 8 | 0.3 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 38 | 1.3 | Intracellular trafficking and secretion |
O | 99 | 3.5 | Posttranslational modification, protein turnover, chaperones |
C | 163 | 5.8 | Energy production and conversion |
G | 272 | 9.6 | Carbohydrate transport and metabolism |
E | 209 | 7.4 | Amino acid transport and metabolism |
F | 85 | 3.0 | Nucleotide transport and metabolism |
H | 129 | 4.6 | Coenzyme transport and metabolism |
I | 93 | 3.3 | Lipid transport and metabolism |
P | 131 | 4.6 | Inorganic ion transport and metabolism |
Q | 50 | 1.8 | Secondary metabolites biosynthesis, transport and catabolism |
R | 358 | 12.7 | General function prediction only |
S | 222 | 7.9 | Function unknown |
- | 1,216 | 32.1 | Not in COGs |